seqtrimnext 2.0.56
SeqtrimNEXT is a customizable and distributed pre-processing software for NGS (Next Generation Sequencing) biological data. It makes use of scbi_mapreduce gem to be able to run in parallel and distributed environments. It is specially suited for Roche 454 (normal and paired-end) & Ilumina datasets, although it could be easyly adapted to any other situation.
Gemfile:
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install:
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Runtime Dependencies (11):
gnuplot
>= 0
narray
>= 0
scbi_blast
>= 0.0.34
scbi_fasta
>= 0.1.7
scbi_fastq
>= 0.0.17
scbi_headers
>= 0.0.2
scbi_mapreduce
>= 0.0.38
scbi_math
>= 0.0.1
scbi_plot
>= 0.0.6
term-ansicolor
>= 1.0.5
xml-simple
>= 1.0.12
Development Dependencies (1):
hoe
>= 2.8.0
Owners:
Authors:
-
Dario Guerrero & Almudena Bocinos
SHA 256 checksum:
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