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full_lengther_next 0.0.8

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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Versiones:

  1. 1.0.6 February 22, 2024 (68,5 KB)
  2. 1.0.5 May 10, 2023 (68,5 KB)
  3. 1.0.4 September 07, 2022 (68,5 KB)
  4. 1.0.3 September 07, 2022 (68,5 KB)
  5. 1.0.2 September 05, 2022 (68,5 KB)
  6. 0.0.8 November 28, 2012 (38 KB)
Mostrar todas las versiones (19 total)

dependencias de Runtime (5):

scbi_blast >= 0.0.37
scbi_fasta >= 0.1.7
scbi_mapreduce >= 0.0.29
scbi_plot >= 0.0.6
xml-simple >= 1.0.12

dependencias de Development (1):

hoe >= 2.8.0

Propietarios:

Autores:

  • Noe Fernandez & Dario Guerrero

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Total de descargas 41.202

Para esta versión 3.524

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Licencias:

N/A

Versión de Ruby requerida: Ninguno

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