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full_lengther_next 0.0.2

FULL-LENGTHERNEXT is a tool adapted to NGS technologies, able to work in parallel and in a distributed way to minimise computing time. It is able to classify unigenes to full-length, 5’-end, 3’-end and internal, suggesting which unknown genes are coding or not. It will be also shown that FULL-LENGTHERNEXT fixes frame shifts, one of the main mistake found in wrong entries of full-length sequences databases, and it is a fast tool to compare different transcriptome assemblies.

Gemfile:
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Installeer:
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Versies:

  1. 1.0.6 February 22, 2024 (68,5 KB)
  2. 1.0.5 May 10, 2023 (68,5 KB)
  3. 1.0.4 September 07, 2022 (68,5 KB)
  4. 1.0.3 September 07, 2022 (68,5 KB)
  5. 1.0.2 September 05, 2022 (68,5 KB)
  6. 0.0.2 February 07, 2012 (33,5 KB)
Toon alle versies (19 totaal)

Runtime afhankelijkheden (5):

scbi_blast >= 0.0.32
scbi_fasta >= 0.1.7
scbi_mapreduce >= 0.0.29
scbi_plot >= 0.0.6
xml-simple >= 1.0.12

Development afhankelijkheden (1):

hoe >= 2.8.0

Eigenaren:

Authors:

  • Noe Fernandez & Dario Guerrero

SHA 256 checksum:

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Total downloads 41.202

Voor deze versie 3.556

Versie vrijgegeven:

Licenties:

N/A

Required Ruby Version: Geen

Links: